What are the two values, and which is the 'missing' one?
On Sound Blasters you see this as well. Early SB Pro/16 models do not have a crystal for the NTSC base frequency. They use the 14.318 MHz clock coming from the ISA bus.
Later cards have their own crystal, so they are decoupled from the ISA bus, and as such do not depend on the motherboard to deliver correct and stable timing (apparently this was an issue on some boards).
You can see them here: Sound Blaster Pro 2 CT1600 Revisions
Perhaps the YMF71x cards are similar: some depend on the ISA bus, some don't.
If the 'missing' crystal can somehow be related to the NTSC frequency, then this would be a plausible explanation.
Edit: nevermind, it was answered already.
Apparently the crystals are used for the ADC/DAC rate.
The Sound Blaster does not do that, it derives the sample rate in 'software': the DSP runs at a fixed frequency, and a divisor is used to reduce its clockspeed to sample rate, where the microprocessor will manually switch to the next sample every time.