I've had an epiphony:
Anytime I try to run dos in full screen (including the C-Prompt), it minimizes it after about 5 seconds. HOWEVER, with C-Prompt, and an old text game called Amnesia, they can run in a window (they don't need to be fullscreen b/c they can just adjust their font size). When they auto minimize (Like WB), they auto restore in a window (UNlike WB). If I restore it (back to fullscreen), it stays open for 5 secs, then it minimizes and restores in a window again.
With WB: it's graphics, it MUST be fullscreen to run. Since the computer can't restore it in a window, it just stays minimized.
As far as SC: StarCraft was written for Win95/98/ME. Win95/98/ME are not operating systems. They're operating ENVIRONMENTS that run over MS-DOS (the actual "OS"). WinNT/2000/XP are ACTUAL operating systems with DOS emulators (C-Prompt). That's why SC follows the same behavior as WB (and every other DOS program I run).
I have to figure out a way to keep the damn thing in fullscreen when I tell it too.