From what I recall, it's possible to use two PCI VGA cards at the same time.
The first one is assigned all requested resources: VGA compatible + PCI specific
The second one: PCI specific only
With normal DOS software, you can only use the first one.
The second one is available for systems with multiple-display support, eg. Windows 98.
I don't know whether it's possible to choose which of the cards should be the first one...
Edit: with PCI VGA + AGP VGA, it should work as above, additionally there's the "Init display first: PCI/AGP" BIOS option.
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